Publications

Found 409 results
2017
Nebbioso A, Carafa V, Conte M, Tambaro FPaolo, Abbondanza C, Martens J, Nees M, Benedetti R, Pallavicini I, Minucci S et al..  2017.  c-Myc Modulation and Acetylation Is a Key HDAC Inhibitor Target in Cancer.. Clin Cancer Res. 23(10):2542-2555.
Forcato M, Nicoletti C, Pal K, Livi CMaria, Ferrari F, Bicciato S.  2017.  Comparison of computational methods for Hi-C data analysis.. Nat Methods. 14(7):679-685.
Bodega B, Marasca F, Ranzani V, Cherubini A, Valle FDella, Neguembor M V, Wassef M, Zippo A, Lanzuolo C, Pagani M et al..  2017.  A cytosolic Ezh1 isoform modulates a PRC2-Ezh1 epigenetic adaptive response in postmitotic cells.. Nat Struct Mol Biol. 24(5):444-452.
Pistore C, Giannoni E, Colangelo T, Rizzo F, Magnani E, Muccillo L, Giurato G, Mancini M, Rizzo S, Riccardi M et al..  2017.  DNA methylation variations are required for epithelial-to-mesenchymal transition induced by cancer-associated fibroblasts in prostate cancer cells.. Oncogene.
Zambelli F, Pavesi G.  2017.  Genome wide features, distribution and correlations of NF-Y binding sites.. Biochim Biophys Acta. 1860(5):581-589.
Franci G, Sarno F, Nebbioso A, Altucci L.  2017.  Identification and characterization of PKF118-310 as a KDM4A inhibitor.. Epigenetics. 12(3):198-205.
Panero R, Rinaldi A, Memoli D, Nassa G, Ravo M, Rizzo F, Tarallo R, Milanesi L, Weisz A, Giurato G.  2017.  iSmaRT: a toolkit for a comprehensive analysis of small RNA-Seq data.. Bioinformatics. 33(6):938-940.
Lo Sardo F, Forcato M, Sacconi A, Capaci V, Zanconato F, Di Agostino S, Del Sal G, Pandolfi PPaolo, Strano S, Bicciato S et al..  2017.  MCM7 and its hosted miR-25, 93 and 106b cluster elicit YAP/TAZ oncogenic activity in lung cancer.. Carcinogenesis. 38(1):64-75.
Dell'aversana C, Giorgio C, Altucci L.  2017.  MicroRNA Expression Profiling Using Agilent One-Color Microarray.. Methods Mol Biol. 1509:169-183.
Kolinjivadi AM, Sannino V, De Antoni A, Zadorozhny K, Kilkenny M, Tècher H, Baldi G, Shen R, Ciccia A, Pellegrini L et al..  2017.  Smarcal1-Mediated Fork Reversal Triggers Mre11-Dependent Degradation of Nascent DNA in the Absence of Brca2 and Stable Rad51 Nucleofilaments. Molecular Cell.
Florio E, Keller S, Coretti L, Affinito O, Scala G, Errico F, Fico A, Boscia F, Sisalli MJosè, Reccia MGiovanna et al..  2017.  Tracking the evolution of epialleles during neural differentiation and brain development: D-Aspartate oxidase as a model gene.. Epigenetics. 12(1):41-54.
2016
Valente S, Mellini P, Spallotta F, Carafa V, Nebbioso A, Polletta L, Carnevale I, Saladini S, Trisciuoglio D, Gabellini C et al..  2016.  1,4-Dihydropyridines Active on the SIRT1/AMPK Pathway Ameliorate Skin Repair and Mitochondrial Function and Exhibit Inhibition of Proliferation in Cancer Cells.. J Med Chem. 59(4):1471-91.
Punzo D, Errico F, Cristino L, Sacchi S, Keller S, Belardo C, Luongo L, Nuzzo T, Imperatore R, Florio E et al..  2016.  Age-Related Changes in D-Aspartate Oxidase Promoter Methylation Control Extracellular D-Aspartate Levels and Prevent Precocious Cell Death during Brain Aging.. J Neurosci. 36(10):3064-78.
Scala G, Affinito O, Palumbo D, Florio E, Monticelli A, Miele G, Chiariotti L, Cocozza S.  2016.  ampliMethProfiler: a pipeline for the analysis of CpG methylation profiles of targeted deep bisulfite sequenced amplicons.. BMC Bioinformatics. 17(1):484.
Caroli J, Taccioli C, De La Fuente A, Serafini P, Bicciato S.  2016.  APTANI: a computational tool to select aptamers through sequence-structure motif analysis of HT-SELEX data.. Bioinformatics. 32(2):161-4.
Gai M, Bianchi FT, Vagnoni C, Vernì F, Bonaccorsi S, Pasquero S, Berto GE, Sgrò F, Chiotto AMa, Annaratone L et al..  2016.  ASPM and CITK regulate spindle orientation by affecting the dynamics of astral microtubules.. EMBO Rep. 17(10):1396-1409.
Pinelli M, Carissimo A, Cutillo L, Lai C-H, Mutarelli M, Moretti MNicoletta, Singh MVeer, Karali M, Carrella D, Pizzo M et al..  2016.  An atlas of gene expression and gene co-regulation in the human retina.. Nucleic Acids Res. 44(12):5773-84.
Sannino V, Costanzo V.  2016.  ATR checkpoint suppression by repetitive DNA.. Cell Cycle. 15(22):2993-2994.
Gregoretti F, Cesarini E, Lanzuolo C, Oliva G, Antonelli L.  2016.  An Automatic Segmentation Method Combining an Active Contour Model and a Classification Technique for Detecting Polycomb-group Proteinsin High-Throughput Microscopy Images.. Methods Mol Biol. 1480:181-97.
Fiacco E, Castagnetti F, Bianconi V, Madaro L, De Bardi M, Nazio F, D'Amico A, Bertini E, Cecconi F, Puri PL et al..  2016.  Autophagy regulates satellite cell ability to regenerate normal and dystrophic muscles.. Cell Death Differ. 23(11):1839-1849.
Ursini G, Cavalleri T, Fazio L, Angrisano T, Iacovelli L, Porcelli A, Maddalena G, Punzi G, Mancini M, Gelao B et al..  2016.  BDNF rs6265 methylation and genotype interact on risk for schizophrenia.. Epigenetics. 11(1)
Ursini G, Cavalleri T, Fazio L, Angrisano T, Iacovelli L, Porcelli A, Maddalena G, Punzi G, Mancini M, Gelao B et al..  2016.  BDNF rs6265 methylation and genotype interact on risk for schizophrenia.. Epigenetics. 11(1):11-23.
Cestarelli V, Fiscon G, Felici G, Bertolazzi P, Weitschek E.  2016.  CAMUR: Knowledge extraction from RNA-seq cancer data through equivalent classification rules.. Bioinformatics. 32(5):697-704.
Iuliano A, Occhipinti A, Angelini C, De Feis I, Liò P.  2016.  Cancer Markers Selection Using Network-Based Cox Regression: A Methodological and Computational Practice.. Front Physiol. 7:208.
Aze A, Sannino V, Soffientini P, Bachi A, Costanzo V.  2016.  Centromeric DNA replication reconstitution reveals DNA loops and ATR checkpoint suppression.. Nat Cell Biol. 18(6):684-91.

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